Many experiments require us to synchronize multiple data streams – from cameras, sensors, microscopes – precisely deliver stimuli, and, quite often, to do everything in a closed-loop setting. The fact that different devices use different software doesn’t make this task easier.
One of the best – and open – solutions to those challenges is Bonsai, a reactive programming language that allows you to collect data from multiple systems, from calcium imaging, through sound recordings to sensors and control output devices – such as feeders, motors, or stimulus delivery systems and build close-loop paradigms. It is easy to learn and implement and robust.
During our workshop, we will introduce basic logic of Bonsai, cover loading and saving data, working with camera to track animals and basics of closed-loop experiments. We will also cover using Arduino alongside Bonsai to control experimental equipment and save the data from your sensors
Requirements: Windows computer, webcam
Instructors:
- Mateusz Kostecki, Heidelberg University
- Jagoda Nawrocka, University of Warsaw
The workshop will take place on Oct 17th, 9:45 AM -5 PM at COS, Heidelberg. Institute. Please find the application form here. The workshop is free of charge!
The workshop is held in stationary form only!
openlabhd.org 